MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,806
rRNA: 9
tRNA: 59
tmRNA: 1
Total number of protein coding genes annotated/found:
1,747
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 88 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5026|JADGKX010000101.1
MBF0772394.1
Genome Viewer
NA
AA
226/75
1-228
hypothetical protein
SEQF5026|JADGKX010000043.1
MBF0772348.1
Genome Viewer
NA
AA
565/188
3-567
LysR family transcriptional regulator
SEQF5026|JADGKX010000077.1
MBF0772377.1
Genome Viewer
NA
AA
383/127
12-394
RHS repeat protein
SEQF5026|JADGKX010000069.1
MBF0772370.1
Genome Viewer
NA
AA
378/126
28-405
VOC family protein
SEQF5026|JADGKX010000092.1
MBF0772389.1
Genome Viewer
NA
AA
279/93
103-381
cation transporter
SEQF5026|JADGKX010000035.1
MBF0772340.1
Genome Viewer
NA
AA
1050/350
107-1156
IS30-like element ISLjo1 family transposase
SEQF5026|JADGKX010000076.1
MBF0772376.1
Genome Viewer
NA
AA
139/46
139-1
hypothetical protein
SEQF5026|JADGKX010000040.1
MBF0772344.1
Genome Viewer
NA
AA
141/47
141-1
hypothetical protein
SEQF5026|JADGKX010000014.1
MBF0771910.1
Genome Viewer
NA
AA
1164/388
189-1352
GNAT family N-acetyltransferase
SEQF5026|JADGKX010000028.1
MBF0772330.1
Genome Viewer
NA
AA
1926/642
194-2119
ABC-F family ATP-binding cassette domain-containing protein
SEQF5026|JADGKX010000046.1
MBF0772351.1
Genome Viewer
NA
AA
209/69
209-1
hypothetical protein
SEQF5026|JADGKX010000068.1
MBF0772369.1
Genome Viewer
NA
AA
256/85
256-1
RNA polymerase subunit sigma
SEQF5026|JADGKX010000084.1
MBF0772383.1
Genome Viewer
NA
AA
259/86
259-1
glycerophosphoryl diester phosphodiesterase membrane domain-containing protein
SEQF5026|JADGKX010000020.1
MBF0772189.1
Genome Viewer
NA
AA
660/220
262-921
amino acid ABC transporter permease
SEQF5026|JADGKX010000063.1
MBF0772365.1
Genome Viewer
NA
AA
264/88
264-1
PadR family transcriptional regulator
SEQF5026|JADGKX010000055.1
MBF0772357.1
Genome Viewer
NA
AA
192/64
269-460
YqhA family protein
SEQF5026|JADGKX010000010.1
MBF0771646.1
Genome Viewer
NA
AA
570/190
270-839
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
SEQF5026|JADGKX010000079.1
MBF0772379.1
Genome Viewer
NA
AA
334/111
334-1
hypothetical protein
SEQF5026|JADGKX010000056.1
MBF0772358.1
Genome Viewer
NA
AA
345/115
345-1
hypothetical protein
SEQF5026|JADGKX010000002.1
MBF0770824.1
Genome Viewer
NA
AA
594/198
373-966
hypothetical protein
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 88 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by